Obviously, the geometric filter works in most cases.
Applying an interaction score to structures from a geometric filter
P(2),Coulombic Electrostatic Interactions
P(3), “Solvent” Exclusion*
P(4), Pairwise amino acid contacts
Training the Scoring function:
Table of final results with Global Scoring:
Summary of method
Some predictions using these methods
The best fit binding model...
Docking using the BiGGER algorithm suggests the location of the two sites.
The two sites on flavodoxin and the single high scoring site on cytochrome c3...
